Browse Source

Fix: correct environment config files

DK Liu 1 year ago
parent
commit
1d44db3742
2 changed files with 11 additions and 94 deletions
  1. 10 93
      environment.yml
  2. 1 1
      requirements.txt

+ 10 - 93
environment.yml

@@ -2,108 +2,25 @@ name: kraken
 channels:
   - defaults
 dependencies:
-  - bzip2=1.0.8=h620ffc9_4
-  - ca-certificates=2023.08.22=hca03da5_0
-  - libffi=3.4.4=hca03da5_0
-  - ncurses=6.4=h313beb8_0
-  - openssl=3.0.12=h1a28f6b_0
-  - pip=23.3=py310hca03da5_0
-  - python=3.10.11=hb885b13_3
-  - readline=8.2=h1a28f6b_0
-  - setuptools=68.0.0=py310hca03da5_0
-  - sqlite=3.41.2=h80987f9_0
-  - tk=8.6.12=hb8d0fd4_0
-  - wheel=0.41.2=py310hca03da5_0
-  - xz=5.4.2=h80987f9_0
-  - zlib=1.2.13=h5a0b063_0
+  - python=3.10.11
+  - pip
   - pip:
-      - altair==5.1.2
-      - annotated-types==0.6.0
-      - anyio==3.7.1
-      - attrs==23.1.0
       - av==10.0.0
-      - blinker==1.7.0
-      - cachetools==5.3.2
-      - certifi==2023.7.22
-      - charset-normalizer==3.3.2
-      - click==8.1.7
-      - contourpy==1.2.0
-      - cycler==0.12.1
-      - decorator==5.1.1
-      - distlib==0.3.7
-      - docopt==0.6.2
-      - docutils==0.20.1
-      - exceptiongroup==1.1.3
       - fastapi==0.104.1
-      - filelock==3.13.1
-      - fonttools==4.44.0
-      - func-timeout==4.3.5
-      - gitdb==4.0.11
-      - gitpython==3.1.40
-      - idna==3.4
-      - importlib-metadata==6.8.0
-      - iniconfig==2.0.0
-      - jinja2==3.1.2
-      - joblib==1.3.2
-      - jsonschema==4.19.2
-      - jsonschema-specifications==2023.7.1
-      - kiwisolver==1.4.5
-      - lockfile==0.12.2
-      - markdown-it-py==3.0.0
-      - markupsafe==2.1.3
-      - matplotlib==3.8.1
-      - mdurl==0.1.2
+      - func_timeout==4.3.5
       - mne==1.5.1
-      - numpy==1.26.1
-      - packaging==23.2
-      - pandas==2.1.2
-      - pid==3.0.4
-      - pillow==10.1.0
-      - pipreqs==0.4.13
-      - platformdirs==3.11.0
-      - pluggy==1.3.0
-      - pooch==1.8.0
-      - protobuf==4.25.0
-      - pyarrow==14.0.1
       - pydantic==2.4.2
-      - pydantic-core==2.10.1
-      - pydeck==0.8.1b0
       - pyedflib==0.1.36
-      - pygments==2.16.1
-      - pyparsing==3.1.1
       - pyserial==3.5
       - pytest==7.4.3
       - pyriemann==0.5
-      - python-daemon==3.0.1
-      - python-dateutil==2.8.2
-      - pytz==2023.3.post1
-      - referencing==0.30.2
-      - requests==2.31.0
-      - rich==13.6.0
-      - rpds-py==0.12.0
-      - scikit-learn==1.3.2
-      - scipy==1.11.3
       - service==0.6.0
-      - setproctitle==1.3.3
-      - six==1.16.0
-      - smmap==5.0.1
-      - sniffio==1.3.0
-      - sqlalchemy==2.0.23
+      - SQLAlchemy==2.0.23
       - starlette==0.27.0
       - streamlit==1.28.1
-      - tenacity==8.2.3
-      - threadpoolctl==3.2.0
-      - toml==0.10.2
-      - tomli==2.0.1
-      - toolz==0.12.0
-      - tornado==6.3.3
-      - tqdm==4.66.1
-      - typing-extensions==4.8.0
-      - tzdata==2023.3
-      - tzlocal==5.2
-      - urllib3==2.0.7
-      - validators==0.22.0
-      - virtualenv==20.24.6
-      - yarg==0.1.9
-      - zipp==3.17.0
-      - opencv_python==4.8.1
+      - joblib==1.3.2
+      - opencv_python~=4.8.1
+      - numpy~=1.26
+      - scipy~=1.11.3
+      - scikit-learn~=1.3.2
+      - matplotlib~=3.8.1

+ 1 - 1
requirements.txt

@@ -16,4 +16,4 @@ service==0.6.0
 SQLAlchemy==2.0.23
 starlette==0.27.0
 streamlit==1.28.1
-opencv_python==4.8.1
+opencv_python~=4.8.1